Blue Jeans
Description
As an IBM researcher, you have been tasked with writing a program that will find commonalities amongst given snippets of DNA that can be correlated with individual survey information to identify new genetic markers.
A DNA base sequence is noted by listing the nitrogen bases in the order in which they are found in the molecule. There are four bases: adenine (A), thymine (T), guanine (G), and cytosine (C). A 6-base DNA sequence could be represented as TAGACC.
Given a set of DNA base sequences, determine the longest series of bases that occurs in all of the sequences.
Input
- A single positive integer m (2 <= m <= 10) indicating the number of base sequences in this dataset.
- m lines each containing a single base sequence consisting of 60 bases.
Output
Sample Input
3
2
GATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
3
GATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATACCAGATA
GATACTAGATACTAGATACTAGATACTAAAGGAAAGGGAAAAGGGGAAAAAGGGGGAAAA
GATACCAGATACCAGATACCAGATACCAAAGGAAAGGGAAAAGGGGAAAAAGGGGGAAAA
3
CATCATCATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ACATCATCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AACATCATCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Sample Output
no significant commonalities
AGATAC
CATCATCAT
Hint
#include<iostream>
#include<cstring>
#include<cstdio>
#include<string>
using namespace std;
int main()
{
char s[][],p[],q[];
int m,n,i,j,k,len;
scanf("%d",&m);
while(m--)
{
q[]='\0';
scanf("%d",&n);
getchar();
for(i=; i<n; i++)
scanf("%s",s[i]);//输入不解释
len=strlen(s[]);
for(i=; i<len; i++ )
{
for(j=len-i; j>; j--)
{
strncpy(p,s[]+i,j);
p[j]='\0';
for(k=; k<n; k++)
if(strstr(s[k],p)==NULL)
break;
if(k==n)
{
if(strlen(p)==strlen(q)&&strcmp(p,q)<)//字符串分段复制函数
strcpy(q,p);
if(strlen(p)>strlen(q))
strcpy(q,p);
}
}
}
if(strlen(q)>)
puts(q);
else
puts("no significant commonalities");
}
return ;
}
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